Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Sh3rf2Q8BZT2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm23272-201ENSMUST00000104053 129 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm11244-201ENSMUST00000121243 237 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm11960-201ENSMUST00000122068 925 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm7504-201ENSMUST00000201449 424 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm5451-201ENSMUST00000080545 579 ntBASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Sh3rf2Q8BZT2 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gm13722-201ENSMUST00000117964 3066 ntBASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gm8194-201ENSMUST00000159783 859 ntBASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gm28388-201ENSMUST00000186262 437 ntBASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Gm34045-201ENSMUST00000217700 988 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 AC124433.1-201ENSMUST00000224483 1063 ntBASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Sh3rf2Q8BZT2 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms