Protein–RNA interactions for Protein: Q8BVF4

Ccdc30, Coiled-coil domain-containing protein 30, mousemouse

Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc30Q8BVF4 Gm2128-201ENSMUST00000108009 2560 ntBASIC15.05■□□□□ 0
Ccdc30Q8BVF4 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc30Q8BVF4 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ccdc30Q8BVF4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc30Q8BVF4 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Mir6927-201ENSMUST00000184494 71 ntBASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Ighv1-48-201ENSMUST00000191795 294 ntBASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gm7848-201ENSMUST00000210739 718 ntBASIC15.05■□□□□ -0
Ccdc30Q8BVF4 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gm37849-201ENSMUST00000194722 1881 ntBASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc30Q8BVF4 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Gm43931-201ENSMUST00000204817 2870 ntBASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Gm13916-201ENSMUST00000117368 628 ntBASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Gm8731-201ENSMUST00000118088 412 ntBASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Gm10807-201ENSMUST00000177134 795 ntBASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.04■□□□□ -0
Ccdc30Q8BVF4 CT009713.8-202ENSMUST00000224732 385 ntBASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC15.04■□□□□ -0
Ccdc30Q8BVF4 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Gm24891-201ENSMUST00000104391 136 ntBASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 AC159747.1-201ENSMUST00000219903 265 ntBASIC15.03■□□□□ -0
Ccdc30Q8BVF4 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.03■□□□□ -0
Ccdc30Q8BVF4 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Gm4978-201ENSMUST00000071565 801 ntBASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc30Q8BVF4 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Gm7964-201ENSMUST00000051522 1378 ntBASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Gm6548-201ENSMUST00000167498 1165 ntBASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC15.02■□□□□ -0
Ccdc30Q8BVF4 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC15.02■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms