Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Gm12418-201ENSMUST00000118116 942 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Gm22344-201ENSMUST00000122642 278 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Gm12246-201ENSMUST00000129126 503 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Gm17796-201ENSMUST00000189015 1213 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Gm8384-201ENSMUST00000190905 704 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC15.08■□□□□ 0
Col16a1Q8BLX7 AC134601.2-201ENSMUST00000221071 130 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Tnfrsf18-201ENSMUST00000040274 804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Gm6157-201ENSMUST00000199935 1897 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Gm10305-201ENSMUST00000195331 2475 ntBASIC15.08■□□□□ 0
Col16a1Q8BLX7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Col16a1Q8BLX7 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm15625-201ENSMUST00000117617 1093 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm13827-201ENSMUST00000148801 372 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm24078-201ENSMUST00000158184 103 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm35960-201ENSMUST00000202712 767 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 AC154759.1-201ENSMUST00000224137 1159 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 CT025618.1-203ENSMUST00000227008 589 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm6641-201ENSMUST00000196100 1315 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm43570-201ENSMUST00000199951 3688 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm43102-201ENSMUST00000201004 2324 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Oprm1-211ENSMUST00000105602 1366 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm23769-201ENSMUST00000104441 121 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 Tex29-204ENSMUST00000166638 561 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Gm4930-201ENSMUST00000219926 1087 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 AC156790.2-201ENSMUST00000227115 568 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 AC105408.1-201ENSMUST00000227771 802 ntBASIC15.07■□□□□ 0
Col16a1Q8BLX7 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.07■□□□□ 0
Col16a1Q8BLX7 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col16a1Q8BLX7 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Npl-201ENSMUST00000041874 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC15.06■□□□□ 0
Col16a1Q8BLX7 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Gm12912-201ENSMUST00000121596 1381 ntBASIC15.06■□□□□ 0
Col16a1Q8BLX7 Gm5822-201ENSMUST00000161562 1378 ntBASIC15.06■□□□□ 0
Col16a1Q8BLX7 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Pex5l-203ENSMUST00000108221 1187 ntTSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 AC102847.1-202ENSMUST00000226313 1245 ntBASIC15.06■□□□□ 0
Col16a1Q8BLX7 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Col16a1Q8BLX7 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col16a1Q8BLX7 Gm37014-201ENSMUST00000194723 2253 ntBASIC15.05■□□□□ 0
Col16a1Q8BLX7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC15.05■□□□□ 0
Col16a1Q8BLX7 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col16a1Q8BLX7 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC15.05■□□□□ 0
Col16a1Q8BLX7 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col16a1Q8BLX7 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Col16a1Q8BLX7 AC156031.2-201ENSMUST00000213107 3310 ntBASIC15.05■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 162.9 ms