Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Samm50Q8BGH2 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Gm14028-201ENSMUST00000117434 479 ntBASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.71□□□□□ -0.21
Samm50Q8BGH2 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Samm50Q8BGH2 Gm9796-201ENSMUST00000062249 2250 ntBASIC13.71□□□□□ -0.21
Samm50Q8BGH2 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Gm8155-201ENSMUST00000216363 1612 ntBASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Samm50Q8BGH2 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Gm24749-201ENSMUST00000157838 343 ntBASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Rprl1-201ENSMUST00000158050 327 ntBASIC13.7□□□□□ -0.22
Samm50Q8BGH2 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Gm38140-201ENSMUST00000193617 2755 ntBASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Gm37969-201ENSMUST00000195777 3409 ntBASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Samm50Q8BGH2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Pfkp-201ENSMUST00000021614 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Samm50Q8BGH2 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms