Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm9192-201ENSMUST00000183221 985 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm44506-201ENSMUST00000206278 965 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm45550-201ENSMUST00000209380 946 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm45398-201ENSMUST00000210561 165 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 AC171241.1-201ENSMUST00000228144 1166 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdh19Q80TF3 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm3150-201ENSMUST00000166418 204 ntBASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Slc2a4rg-ps-202ENSMUST00000176590 1143 ntBASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm45113-201ENSMUST00000207518 165 ntBASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Trim25-201ENSMUST00000000284 5566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdh19Q80TF3 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm14665-201ENSMUST00000122294 557 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm23958-201ENSMUST00000157207 105 ntBASIC11.5□□□□□ -0.57
Pcdh19Q80TF3 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms