Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Rad54bQ6PFE3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Adgrv1-214ENSMUST00000224088 1492 ntBASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm2991-201ENSMUST00000173338 480 ntBASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm8343-201ENSMUST00000182705 994 ntBASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Rad54bQ6PFE3 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Btrc-209ENSMUST00000224478 2194 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gm43127-201ENSMUST00000195890 2789 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gm22133-201ENSMUST00000102082 109 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gm17420-201ENSMUST00000164753 153 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gm4310-201ENSMUST00000177847 889 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Rps4l-202ENSMUST00000204242 789 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gm9368-201ENSMUST00000219348 831 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.75□□□□□ -0.53
Rad54bQ6PFE3 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms