Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Snrnp40Q6PE01 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm6322-201ENSMUST00000118789 1004 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm9673-201ENSMUST00000119287 781 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm14213-201ENSMUST00000119778 768 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm12791-201ENSMUST00000120788 655 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm14441-201ENSMUST00000121960 540 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm17192-201ENSMUST00000169031 511 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm7719-201ENSMUST00000182374 975 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm18776-201ENSMUST00000188833 654 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm5641-201ENSMUST00000091130 1488 ntBASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Snrnp40Q6PE01 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm11619-201ENSMUST00000117474 237 ntBASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm11500-201ENSMUST00000118237 601 ntBASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm12179-201ENSMUST00000118344 1272 ntBASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm11578-201ENSMUST00000118530 459 ntBASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm15329-201ENSMUST00000121408 155 ntBASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm15549-201ENSMUST00000121595 622 ntBASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm13445-201ENSMUST00000121664 307 ntBASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Gm45856-201ENSMUST00000212752 416 ntBASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Snrnp40Q6PE01 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms