Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm11511-201ENSMUST00000118146 540 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm14208-201ENSMUST00000119645 678 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm14277-201ENSMUST00000121195 360 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm5616-201ENSMUST00000165252 384 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm8741-201ENSMUST00000174736 384 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm28071-201ENSMUST00000190355 478 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm5363-201ENSMUST00000211927 938 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Scn8a-203ENSMUST00000108908 7030 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
ParpbpQ6IRT3 Mtf1-202ENSMUST00000106193 7554 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Gm28719-201ENSMUST00000187779 1757 ntBASIC11□□□□□ -0.65
ParpbpQ6IRT3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11□□□□□ -0.65
ParpbpQ6IRT3 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC11□□□□□ -0.65
ParpbpQ6IRT3 Gm15711-201ENSMUST00000118889 535 ntBASIC11□□□□□ -0.65
ParpbpQ6IRT3 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11□□□□□ -0.65
ParpbpQ6IRT3 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11□□□□□ -0.65
ParpbpQ6IRT3 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11□□□□□ -0.65
ParpbpQ6IRT3 Gm19287-201ENSMUST00000203190 358 ntBASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms