Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Gm3096-201ENSMUST00000185770 364 ntBASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Gm8956-201ENSMUST00000203939 825 ntBASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Gzmn-202ENSMUST00000225535 989 ntBASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC12.9□□□□□ -0.34
Krt39Q6IFX4 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Krt39Q6IFX4 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Krt39Q6IFX4 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Krt39Q6IFX4 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Krt39Q6IFX4 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Gm20482-202ENSMUST00000174729 825 ntBASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Gm19187-201ENSMUST00000206781 892 ntBASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 AC122371.3-201ENSMUST00000223402 1061 ntBASIC12.89□□□□□ -0.35
Krt39Q6IFX4 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 BC043934-202ENSMUST00000185694 2356 ntBASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Krt39Q6IFX4 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC12.89□□□□□ -0.35
Krt39Q6IFX4 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 AC154537.1-201ENSMUST00000226101 1304 ntBASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Gm11511-201ENSMUST00000118146 540 ntBASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.88□□□□□ -0.35
Krt39Q6IFX4 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Gm13347-201ENSMUST00000120298 1353 ntBASIC12.88□□□□□ -0.35
Krt39Q6IFX4 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Krt39Q6IFX4 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms