Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Sox17Q61473 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Sox17Q61473 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC10.92□□□□□ -0.66
Sox17Q61473 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.92□□□□□ -0.66
Sox17Q61473 Gm19327-201ENSMUST00000220651 3271 ntBASIC10.92□□□□□ -0.66
Sox17Q61473 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Gm38241-201ENSMUST00000192641 898 ntBASIC10.92□□□□□ -0.66
Sox17Q61473 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Gm37954-201ENSMUST00000195400 2071 ntBASIC10.92□□□□□ -0.66
Sox17Q61473 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.92□□□□□ -0.66
Sox17Q61473 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.92□□□□□ -0.66
Sox17Q61473 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.92□□□□□ -0.66
Sox17Q61473 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.92□□□□□ -0.66
Sox17Q61473 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Sox17Q61473 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.91□□□□□ -0.66
Sox17Q61473 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC10.91□□□□□ -0.66
Sox17Q61473 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.91□□□□□ -0.66
Sox17Q61473 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Car12-202ENSMUST00000085420 3639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox17Q61473 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC10.91□□□□□ -0.66
Sox17Q61473 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Sox17Q61473 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox17Q61473 Gm6114-201ENSMUST00000182472 968 ntBASIC10.91□□□□□ -0.66
Sox17Q61473 Gm2546-201ENSMUST00000182630 991 ntBASIC10.91□□□□□ -0.66
Sox17Q61473 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox17Q61473 Gm807-202ENSMUST00000224929 408 ntBASIC10.91□□□□□ -0.66
Sox17Q61473 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Sox17Q61473 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Sox17Q61473 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Pced1a-201ENSMUST00000089581 3496 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.91□□□□□ -0.66
Sox17Q61473 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.91□□□□□ -0.66
Sox17Q61473 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Vti1a-201ENSMUST00000095950 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Sox17Q61473 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Sox17Q61473 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox17Q61473 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Sox17Q61473 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC10.9□□□□□ -0.66
Sox17Q61473 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms