Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Gm3150-201ENSMUST00000166418 204 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Gm10807-201ENSMUST00000177134 795 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Gm6905-201ENSMUST00000205729 511 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Spcs1-203ENSMUST00000226374 592 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Gm4978-201ENSMUST00000071565 801 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Six4Q61321 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC11.77□□□□□ -0.53
Six4Q61321 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Six4Q61321 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Gm43417-201ENSMUST00000201586 5207 ntBASIC11.77□□□□□ -0.53
Six4Q61321 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Six4Q61321 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Six4Q61321 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.76□□□□□ -0.53
Six4Q61321 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.76□□□□□ -0.53
Six4Q61321 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Gm11500-201ENSMUST00000118237 601 ntBASIC11.76□□□□□ -0.53
Six4Q61321 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC11.76□□□□□ -0.53
Six4Q61321 Gm24844-201ENSMUST00000158679 127 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Rn7s1-201ENSMUST00000174924 300 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Rn7s2-201ENSMUST00000175032 300 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Gm26461-201ENSMUST00000175064 290 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.76□□□□□ -0.53
Six4Q61321 Mir6979-201ENSMUST00000183927 56 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Gm29499-201ENSMUST00000189151 486 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Gm28329-201ENSMUST00000191208 689 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Gm29171-201ENSMUST00000191397 486 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.76□□□□□ -0.53
Six4Q61321 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.76□□□□□ -0.53
Six4Q61321 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Six4Q61321 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.76□□□□□ -0.53
Six4Q61321 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Six4Q61321 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.76□□□□□ -0.53
Six4Q61321 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC11.75□□□□□ -0.53
Six4Q61321 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.75□□□□□ -0.53
Six4Q61321 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.75□□□□□ -0.53
Six4Q61321 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC11.75□□□□□ -0.53
Six4Q61321 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Six4Q61321 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Six4Q61321 Gm20426-201ENSMUST00000173657 440 ntBASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms