Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Cln3Q61124 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cln3Q61124 Sumo2-203ENSMUST00000117589 987 ntTSL 3 BASIC12.83□□□□□ -0.36
Cln3Q61124 Gm14071-201ENSMUST00000117817 509 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 Gm13183-201ENSMUST00000118615 789 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cln3Q61124 Gm24248-201ENSMUST00000157321 322 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 Gm22379-201ENSMUST00000157480 131 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC12.83□□□□□ -0.36
Cln3Q61124 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.83□□□□□ -0.36
Cln3Q61124 Gm27390-201ENSMUST00000184516 176 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 Gm38314-201ENSMUST00000195709 625 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.83□□□□□ -0.36
Cln3Q61124 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Cln3Q61124 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC12.83□□□□□ -0.36
Cln3Q61124 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cln3Q61124 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Cln3Q61124 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.83□□□□□ -0.36
Cln3Q61124 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.83□□□□□ -0.36
Cln3Q61124 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Cln3Q61124 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Cln3Q61124 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Rubie-203ENSMUST00000227803 2430 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Gm37019-201ENSMUST00000192133 2134 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
Cln3Q61124 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.82□□□□□ -0.36
Cln3Q61124 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC12.82□□□□□ -0.36
Cln3Q61124 Gm12179-201ENSMUST00000118344 1272 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC12.82□□□□□ -0.36
Cln3Q61124 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Gm17192-201ENSMUST00000169031 511 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 Gm23694-201ENSMUST00000179335 110 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
Cln3Q61124 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Cln3Q61124 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.82□□□□□ -0.36
Cln3Q61124 CT009527.1-201ENSMUST00000224205 339 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.82□□□□□ -0.36
Cln3Q61124 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cln3Q61124 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cln3Q61124 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.82□□□□□ -0.36
Cln3Q61124 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cln3Q61124 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Hormad1-201ENSMUST00000029754 1385 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cln3Q61124 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 Ighv2-1-201ENSMUST00000170946 353 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 A330048O09Rik-201ENSMUST00000180777 672 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cln3Q61124 Gm37629-201ENSMUST00000193635 1050 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 Gm38170-201ENSMUST00000195404 816 ntBASIC12.81□□□□□ -0.36
Cln3Q61124 Gm43912-201ENSMUST00000204352 538 ntBASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms