Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Syne3Q4FZC9 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm43963-201ENSMUST00000203466 2488 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm4157-201ENSMUST00000211647 679 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm5363-201ENSMUST00000211927 938 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 AC107638.1-201ENSMUST00000213690 1061 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Gm6157-201ENSMUST00000199935 1897 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Nfia-202ENSMUST00000075448 9526 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Rgr-203ENSMUST00000225070 4704 ntBASIC12.42□□□□□ -0.42
Syne3Q4FZC9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm26286-201ENSMUST00000104166 134 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm15711-201ENSMUST00000118889 535 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm12997-201ENSMUST00000120207 640 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm11660-201ENSMUST00000120955 412 ntBASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.41□□□□□ -0.42
Syne3Q4FZC9 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms