Protein–RNA interactions for Protein: Q4FJU9

Tmem40, Transmembrane protein 40, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem40Q4FJU9 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm22133-201ENSMUST00000102082 109 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Mir680-2-201ENSMUST00000102163 110 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm23251-201ENSMUST00000103773 110 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm11989-201ENSMUST00000117240 672 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm11362-201ENSMUST00000118838 850 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm8285-201ENSMUST00000208293 759 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm17827-201ENSMUST00000211825 742 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 AC161250.1-201ENSMUST00000213426 1111 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 AC153532.1-201ENSMUST00000218126 1111 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 AC110816.1-201ENSMUST00000218559 980 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 AC132881.1-201ENSMUST00000223780 1062 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Olfr1093-201ENSMUST00000055273 969 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Zfp125-201ENSMUST00000079237 2488 ntBASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
Tmem40Q4FJU9 Gm28649-201ENSMUST00000189153 1581 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Gm45206-201ENSMUST00000206885 2285 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Hoxa1-201ENSMUST00000000964 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Gm11941-201ENSMUST00000119904 610 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Gm25881-201ENSMUST00000157783 103 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Gm8194-201ENSMUST00000159783 859 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Mir7677-201ENSMUST00000184226 67 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Gm42599-201ENSMUST00000201308 469 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 AC133602.1-201ENSMUST00000227510 509 ntBASIC10.22□□□□□ -0.77
Tmem40Q4FJU9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 45.6 ms