Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.18□□□□□ -0.78
Shisa3Q3UPR0 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Cntn4-203ENSMUST00000113258 2464 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Tacc2-217ENSMUST00000209108 3310 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm15198-201ENSMUST00000117283 177 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm13786-201ENSMUST00000122371 333 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm5656-201ENSMUST00000171020 1096 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Mospd4-201ENSMUST00000180618 576 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm27516-201ENSMUST00000184237 98 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm29396-201ENSMUST00000185659 716 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm42937-201ENSMUST00000197360 752 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm17931-201ENSMUST00000208132 634 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Lect2-202ENSMUST00000225183 823 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 AC140209.1-201ENSMUST00000227875 284 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Rnf212-201ENSMUST00000068946 288 ntTSL 5 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Olfr1447-201ENSMUST00000071484 1113 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm5941-201ENSMUST00000096371 560 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Shisa3Q3UPR0 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Gm42995-201ENSMUST00000197047 1330 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Gm14247-201ENSMUST00000120950 237 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Gm5970-201ENSMUST00000131638 1216 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Gm13316-201ENSMUST00000140537 691 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Gm8988-201ENSMUST00000155015 1240 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Gm8494-201ENSMUST00000178171 1233 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Gm5706-201ENSMUST00000181525 993 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 Mir8109-201ENSMUST00000184375 117 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.16□□□□□ -0.78
Shisa3Q3UPR0 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms