Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Dnajc10-201ENSMUST00000028392 4042 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Cdc23-203ENSMUST00000133181 4133 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Pop1-201ENSMUST00000052290 3395 ntAPPRIS P4 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Pop1-202ENSMUST00000079028 3275 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gm43817-201ENSMUST00000196459 2262 ntBASIC9.56□□□□□ -0.88
Trim63Q38HM4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gm12036-201ENSMUST00000120008 530 ntBASIC9.56□□□□□ -0.88
Trim63Q38HM4 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gm8116-201ENSMUST00000182917 1201 ntBASIC9.56□□□□□ -0.88
Trim63Q38HM4 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gm28659-201ENSMUST00000188013 759 ntBASIC9.56□□□□□ -0.88
Trim63Q38HM4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gm5161-201ENSMUST00000075243 853 ntBASIC9.56□□□□□ -0.88
Trim63Q38HM4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gm38014-201ENSMUST00000193349 2612 ntBASIC9.56□□□□□ -0.88
Trim63Q38HM4 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gtf3c6-206ENSMUST00000217537 2526 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Prdm1-204ENSMUST00000218369 2517 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 9530059O14Rik-201ENSMUST00000181107 3978 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Olfr707-205ENSMUST00000214112 1735 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Fam47e-202ENSMUST00000131166 1500 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 P2ry14-206ENSMUST00000197841 2476 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim63Q38HM4 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 2310057M21Rik-201ENSMUST00000059438 6773 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Tcaf1-201ENSMUST00000045054 5257 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Fam161b-202ENSMUST00000065536 3000 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Dgcr2-201ENSMUST00000012152 4045 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Scnn1a-201ENSMUST00000081440 3499 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm5566-201ENSMUST00000116118 459 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm13183-201ENSMUST00000118615 789 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm11978-201ENSMUST00000122315 466 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm17058-201ENSMUST00000168951 928 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm17971-201ENSMUST00000190239 806 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm43002-201ENSMUST00000200310 155 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm5864-201ENSMUST00000202263 970 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm18049-201ENSMUST00000208909 581 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 AC090659.2-201ENSMUST00000225378 1186 ntBASIC9.55□□□□□ -0.88
Trim63Q38HM4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Card14-201ENSMUST00000053245 3958 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC9.55□□□□□ -0.88
Trim63Q38HM4 Kit-201ENSMUST00000005815 5214 ntAPPRIS P3 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms