Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Sh2d1a-201ENSMUST00000005839 883 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gm43152-201ENSMUST00000202495 1638 ntBASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Ush2AQ2QI47 Glns-ps1-201ENSMUST00000120291 1118 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm17134-201ENSMUST00000166593 437 ntTSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Trav9n-1-201ENSMUST00000185224 339 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm6439-201ENSMUST00000199849 862 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Cd69-203ENSMUST00000204411 560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm21818-202ENSMUST00000225144 894 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm5910-201ENSMUST00000211819 1746 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm5472-201ENSMUST00000178604 1678 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm12011-201ENSMUST00000119734 618 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm12297-201ENSMUST00000121380 979 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 AV099323-201ENSMUST00000124336 921 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 1700018A04Rik-203ENSMUST00000150418 706 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Snord55-201ENSMUST00000174939 79 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm37643-201ENSMUST00000195369 1260 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 AC113282.4-201ENSMUST00000225273 903 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Tceanc2-203ENSMUST00000058585 766 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm43548-201ENSMUST00000197139 2353 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Kcnk16-202ENSMUST00000225596 2127 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Pabpc5-202ENSMUST00000113366 2243 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 1700019P21Rik-201ENSMUST00000186955 411 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 C130083M11Rik-201ENSMUST00000197171 2072 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm15953-201ENSMUST00000117656 1732 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm9244-201ENSMUST00000056767 2129 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Pde7a-203ENSMUST00000121951 382 ntTSL 3 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Zfp410-203ENSMUST00000220931 1569 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 AC130217.1-201ENSMUST00000224146 909 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Olfr225-201ENSMUST00000055276 1260 ntAPPRIS ALT2 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 1110017D15Rik-202ENSMUST00000095126 884 ntTSL 3 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Snora68-201ENSMUST00000104375 131 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm11929-201ENSMUST00000118175 945 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm19815-201ENSMUST00000175818 335 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm37944-201ENSMUST00000194233 414 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Pf4-203ENSMUST00000202625 411 ntTSL 2 BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Gm18749-201ENSMUST00000222410 692 ntBASIC5.95□□□□□ -1.46
Ush2AQ2QI47 Tpm1-203ENSMUST00000050905 1259 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Ush2AQ2QI47 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms