Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Gm25766-201ENSMUST00000104101 131 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm15329-201ENSMUST00000121408 155 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm37284-201ENSMUST00000193607 539 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm44158-201ENSMUST00000203881 505 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm44008-201ENSMUST00000204345 412 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm23680-201ENSMUST00000083162 164 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Hoxc4Q08624 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 AC156031.2-201ENSMUST00000213107 3310 ntBASIC11.22□□□□□ -0.61
Hoxc4Q08624 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.22□□□□□ -0.61
Hoxc4Q08624 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gm26134-201ENSMUST00000178484 110 ntBASIC11.22□□□□□ -0.61
Hoxc4Q08624 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.22□□□□□ -0.61
Hoxc4Q08624 AC167022.1-201ENSMUST00000218647 1458 ntBASIC11.22□□□□□ -0.61
Hoxc4Q08624 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hoxc4Q08624 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.21□□□□□ -0.61
Hoxc4Q08624 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Gm14892-201ENSMUST00000117636 267 ntBASIC11.21□□□□□ -0.61
Hoxc4Q08624 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Hoxc4Q08624 Gm8302-201ENSMUST00000119217 852 ntBASIC11.21□□□□□ -0.61
Hoxc4Q08624 Gm13182-201ENSMUST00000122241 312 ntBASIC11.21□□□□□ -0.61
Hoxc4Q08624 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hoxc4Q08624 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms