Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VcpQ01853 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.52□□□□□ -0.4
VcpQ01853 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 AC123619.2-202ENSMUST00000225097 1568 ntBASIC12.52□□□□□ -0.4
VcpQ01853 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.52□□□□□ -0.4
VcpQ01853 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.52□□□□□ -0.4
VcpQ01853 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VcpQ01853 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
VcpQ01853 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC12.52□□□□□ -0.41
VcpQ01853 Gm2517-201ENSMUST00000215651 348 ntBASIC12.52□□□□□ -0.41
VcpQ01853 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
VcpQ01853 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
VcpQ01853 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.52□□□□□ -0.41
VcpQ01853 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC12.52□□□□□ -0.41
VcpQ01853 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
VcpQ01853 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
VcpQ01853 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
VcpQ01853 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Gm18983-201ENSMUST00000222884 2729 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
VcpQ01853 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.51□□□□□ -0.41
VcpQ01853 Gm7722-201ENSMUST00000120646 741 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
VcpQ01853 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC12.51□□□□□ -0.41
VcpQ01853 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Mir7076-201ENSMUST00000183519 74 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Gm5733-201ENSMUST00000190232 939 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Gm18038-201ENSMUST00000197900 485 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Gm19091-201ENSMUST00000208120 978 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.51□□□□□ -0.41
VcpQ01853 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC12.51□□□□□ -0.41
VcpQ01853 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
VcpQ01853 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC12.51□□□□□ -0.41
VcpQ01853 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.51□□□□□ -0.41
VcpQ01853 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
VcpQ01853 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
VcpQ01853 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
VcpQ01853 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms