Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Dctn4-202ENSMUST00000223590 1530 ntBASIC9.99□□□□□ -0.81
Smn1P97801 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC9.99□□□□□ -0.81
Smn1P97801 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 AC154462.2-201ENSMUST00000227519 370 ntBASIC9.99□□□□□ -0.81
Smn1P97801 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Smn1P97801 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC9.99□□□□□ -0.81
Smn1P97801 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Gm9466-201ENSMUST00000218144 2246 ntBASIC9.99□□□□□ -0.81
Smn1P97801 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Igsf3-202ENSMUST00000195164 3876 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Smn1P97801 Tob2-201ENSMUST00000050467 3994 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Smn1P97801 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 D930020B18Rik-201ENSMUST00000120642 3335 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 Gm5847-201ENSMUST00000178959 1595 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Mir1247-201ENSMUST00000116706 82 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Gm37008-201ENSMUST00000195712 319 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Gm43118-201ENSMUST00000199149 775 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Gm6266-201ENSMUST00000203844 806 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.98□□□□□ -0.81
Smn1P97801 AC099934.4-201ENSMUST00000220745 523 ntTSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.98□□□□□ -0.81
Smn1P97801 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Smn1P97801 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.98□□□□□ -0.81
Smn1P97801 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Smn1P97801 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Smn1P97801 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 AC211878.3-201ENSMUST00000222629 2018 ntBASIC9.97□□□□□ -0.81
Smn1P97801 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Smn1P97801 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Smn1P97801 AC154314.2-201ENSMUST00000223677 3502 ntBASIC9.97□□□□□ -0.81
Smn1P97801 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 78.1 ms