Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Npas1P97459 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Gm13437-201ENSMUST00000122434 1981 ntBASIC9.81□□□□□ -0.84
Npas1P97459 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Kansl1-201ENSMUST00000018556 5061 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.81□□□□□ -0.84
Npas1P97459 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Npas1P97459 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 Gm12367-202ENSMUST00000146909 2105 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Gm24644-201ENSMUST00000157114 139 ntBASIC9.81□□□□□ -0.84
Npas1P97459 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC9.81□□□□□ -0.84
Npas1P97459 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC9.81□□□□□ -0.84
Npas1P97459 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Npas1P97459 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 AC138329.2-201ENSMUST00000225579 1842 ntBASIC9.81□□□□□ -0.84
Npas1P97459 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.81□□□□□ -0.84
Npas1P97459 Gm8036-201ENSMUST00000118089 1718 ntBASIC9.81□□□□□ -0.84
Npas1P97459 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.81□□□□□ -0.84
Npas1P97459 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Npas1P97459 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Aebp1-202ENSMUST00000109829 2541 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC9.81□□□□□ -0.84
Npas1P97459 Zfp775-201ENSMUST00000061720 4083 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Npas1P97459 Dhcr7-211ENSMUST00000207143 1652 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Nop2-201ENSMUST00000044200 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Unc5cl-201ENSMUST00000074574 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Rasgrp4-211ENSMUST00000203380 3077 ntTSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Nfya-202ENSMUST00000078800 3653 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Gm6189-201ENSMUST00000164487 2082 ntBASIC9.8□□□□□ -0.84
Npas1P97459 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Npas1P97459 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC9.8□□□□□ -0.84
Npas1P97459 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.8□□□□□ -0.84
Npas1P97459 Gm12502-201ENSMUST00000120197 444 ntBASIC9.8□□□□□ -0.84
Npas1P97459 Mir1894-201ENSMUST00000122802 81 ntBASIC9.8□□□□□ -0.84
Npas1P97459 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.8□□□□□ -0.84
Npas1P97459 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC9.8□□□□□ -0.84
Npas1P97459 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Auts2-212ENSMUST00000178555 309 ntBASIC9.8□□□□□ -0.84
Npas1P97459 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC9.8□□□□□ -0.84
Npas1P97459 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.8□□□□□ -0.84
Npas1P97459 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Gm5035-201ENSMUST00000215581 927 ntBASIC9.8□□□□□ -0.84
Npas1P97459 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Npas1P97459 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Npas1P97459 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms