Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Gm14071-201ENSMUST00000117817 509 ntBASIC12.71□□□□□ -0.37
Trim43cP86449 Gm11500-201ENSMUST00000118237 601 ntBASIC12.71□□□□□ -0.37
Trim43cP86449 Gm4909-201ENSMUST00000118749 794 ntBASIC12.71□□□□□ -0.37
Trim43cP86449 Gm6506-201ENSMUST00000119775 1136 ntBASIC12.71□□□□□ -0.37
Trim43cP86449 Gm13461-201ENSMUST00000120980 662 ntBASIC12.71□□□□□ -0.37
Trim43cP86449 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.71□□□□□ -0.37
Trim43cP86449 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
Trim43cP86449 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Trim43cP86449 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Gm38319-201ENSMUST00000194537 1266 ntBASIC12.71□□□□□ -0.37
Trim43cP86449 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43cP86449 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43cP86449 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC12.71□□□□□ -0.37
Trim43cP86449 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trim43cP86449 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trim43cP86449 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.71□□□□□ -0.38
Trim43cP86449 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43cP86449 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43cP86449 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.71□□□□□ -0.38
Trim43cP86449 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Trim43cP86449 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43cP86449 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC12.71□□□□□ -0.38
Trim43cP86449 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trim43cP86449 Gm37648-201ENSMUST00000192072 2563 ntBASIC12.71□□□□□ -0.38
Trim43cP86449 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim43cP86449 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim43cP86449 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim43cP86449 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim43cP86449 Gm29164-201ENSMUST00000185454 1024 ntBASIC12.7□□□□□ -0.38
Trim43cP86449 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.7□□□□□ -0.38
Trim43cP86449 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC12.7□□□□□ -0.38
Trim43cP86449 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.7□□□□□ -0.38
Trim43cP86449 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Mir433-201ENSMUST00000093564 124 ntBASIC12.7□□□□□ -0.38
Trim43cP86449 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Trim43cP86449 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim43cP86449 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trim43cP86449 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Trim43cP86449 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trim43cP86449 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trim43cP86449 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43cP86449 Gm6580-201ENSMUST00000117504 1357 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43cP86449 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trim43cP86449 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Gm43931-201ENSMUST00000204817 2870 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trim43cP86449 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Gm44573-201ENSMUST00000191753 2370 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trim43cP86449 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43cP86449 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trim43cP86449 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.69□□□□□ -0.38
Trim43cP86449 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 Gm14277-201ENSMUST00000121195 360 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC12.69□□□□□ -0.38
Trim43cP86449 Gm23085-201ENSMUST00000157849 293 ntBASIC12.69□□□□□ -0.38
Trim43cP86449 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Trim43cP86449 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms