Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.48□□□□□ -0.73
SgcbP82349 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.48□□□□□ -0.73
SgcbP82349 Gm26047-201ENSMUST00000157308 113 ntBASIC10.48□□□□□ -0.73
SgcbP82349 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.48□□□□□ -0.73
SgcbP82349 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SgcbP82349 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.48□□□□□ -0.73
SgcbP82349 Gm38216-201ENSMUST00000194872 1214 ntBASIC10.48□□□□□ -0.73
SgcbP82349 Gm26047-202ENSMUST00000198840 115 ntBASIC10.48□□□□□ -0.73
SgcbP82349 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC10.48□□□□□ -0.73
SgcbP82349 Gm1821-202ENSMUST00000227415 750 ntBASIC10.48□□□□□ -0.73
SgcbP82349 Scn10a-204ENSMUST00000214408 5877 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
SgcbP82349 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
SgcbP82349 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.48□□□□□ -0.73
SgcbP82349 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Rtn3-204ENSMUST00000088171 4973 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
SgcbP82349 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.47□□□□□ -0.73
SgcbP82349 Gm9129-201ENSMUST00000218173 1689 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.47□□□□□ -0.73
SgcbP82349 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
SgcbP82349 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Olfr647-ps1-201ENSMUST00000121599 960 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Gm14441-201ENSMUST00000121960 540 ntBASIC10.47□□□□□ -0.73
SgcbP82349 B9d1os-201ENSMUST00000137010 674 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.47□□□□□ -0.73
SgcbP82349 Gm8815-201ENSMUST00000173809 620 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Gm18827-201ENSMUST00000188341 790 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Gm9136-201ENSMUST00000193368 454 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Gm36943-201ENSMUST00000194422 282 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Gm38117-201ENSMUST00000194653 939 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Gm38170-201ENSMUST00000195404 816 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.47□□□□□ -0.73
SgcbP82349 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Gm45575-201ENSMUST00000210283 548 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Ntng1-201ENSMUST00000051253 327 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.47□□□□□ -0.73
SgcbP82349 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.47□□□□□ -0.73
SgcbP82349 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.47□□□□□ -0.73
SgcbP82349 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
SgcbP82349 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.47□□□□□ -0.73
SgcbP82349 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
SgcbP82349 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.46□□□□□ -0.73
SgcbP82349 Gm19692-201ENSMUST00000203856 2084 ntBASIC10.46□□□□□ -0.73
SgcbP82349 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
SgcbP82349 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms