Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.67□□□□□ -0.38
CiitaP79621 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.67□□□□□ -0.38
CiitaP79621 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.67□□□□□ -0.38
CiitaP79621 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CiitaP79621 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CiitaP79621 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.66□□□□□ -0.38
CiitaP79621 Gm45053-201ENSMUST00000206112 2499 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
CiitaP79621 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC12.66□□□□□ -0.38
CiitaP79621 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CiitaP79621 Gm23272-201ENSMUST00000104053 129 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.66□□□□□ -0.38
CiitaP79621 Gm11500-201ENSMUST00000118237 601 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CiitaP79621 Gm14942-201ENSMUST00000119642 336 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.66□□□□□ -0.38
CiitaP79621 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Rpl9-ps7-201ENSMUST00000140507 579 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.66□□□□□ -0.38
CiitaP79621 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
CiitaP79621 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.66□□□□□ -0.38
CiitaP79621 Gm27910-201ENSMUST00000185004 107 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Gm37981-201ENSMUST00000194280 535 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 AC141438.2-201ENSMUST00000215068 271 ntBASIC12.66□□□□□ -0.38
CiitaP79621 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.66□□□□□ -0.38
CiitaP79621 AC135114.1-201ENSMUST00000228682 270 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Rpl9-ps4-201ENSMUST00000075549 579 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Gm5451-201ENSMUST00000080545 579 ntBASIC12.66□□□□□ -0.38
CiitaP79621 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CiitaP79621 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC12.66□□□□□ -0.38
CiitaP79621 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.66□□□□□ -0.38
CiitaP79621 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
CiitaP79621 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC12.66□□□□□ -0.38
CiitaP79621 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CiitaP79621 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CiitaP79621 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
CiitaP79621 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Gm25076-201ENSMUST00000104098 132 ntBASIC12.65□□□□□ -0.38
CiitaP79621 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.65□□□□□ -0.38
CiitaP79621 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC12.65□□□□□ -0.38
CiitaP79621 Gm9645-201ENSMUST00000197131 792 ntBASIC12.65□□□□□ -0.38
CiitaP79621 Gm7504-201ENSMUST00000201449 424 ntBASIC12.65□□□□□ -0.38
CiitaP79621 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC12.65□□□□□ -0.38
CiitaP79621 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.65□□□□□ -0.38
CiitaP79621 CT485607.1-201ENSMUST00000216100 85 ntBASIC12.65□□□□□ -0.38
CiitaP79621 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Olfr462-201ENSMUST00000049743 936 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
CiitaP79621 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CiitaP79621 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.65□□□□□ -0.38
CiitaP79621 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms