Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Gramd1b-213ENSMUST00000211853 2659 ntTSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Shox2P70390 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.52□□□□□ -0.57
Shox2P70390 Gm38273-201ENSMUST00000194987 2382 ntBASIC11.52□□□□□ -0.57
Shox2P70390 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Shox2P70390 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.51□□□□□ -0.57
Shox2P70390 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
Shox2P70390 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.51□□□□□ -0.57
Shox2P70390 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.51□□□□□ -0.57
Shox2P70390 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC11.51□□□□□ -0.57
Shox2P70390 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
Shox2P70390 Gm16215-201ENSMUST00000161990 637 ntBASIC11.51□□□□□ -0.57
Shox2P70390 Gm27023-201ENSMUST00000182372 285 ntBASIC11.51□□□□□ -0.57
Shox2P70390 Gm5745-201ENSMUST00000183748 313 ntBASIC11.51□□□□□ -0.57
Shox2P70390 Gm29164-201ENSMUST00000185454 1024 ntBASIC11.51□□□□□ -0.57
Shox2P70390 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.51□□□□□ -0.57
Shox2P70390 Gm18065-201ENSMUST00000221395 526 ntBASIC11.51□□□□□ -0.57
Shox2P70390 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Shox2P70390 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.51□□□□□ -0.57
Shox2P70390 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Shox2P70390 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Shox2P70390 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 E2f8-201ENSMUST00000058745 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Nos1ap-203ENSMUST00000160466 1533 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Tia1-201ENSMUST00000095752 3130 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.5□□□□□ -0.57
Shox2P70390 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.5□□□□□ -0.57
Shox2P70390 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.5□□□□□ -0.57
Shox2P70390 Wdyhv1-203ENSMUST00000226889 394 ntBASIC11.5□□□□□ -0.57
Shox2P70390 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Shox2P70390 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Shox2P70390 Spata5-201ENSMUST00000029277 2890 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Arhgap6-204ENSMUST00000112129 2487 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Cped1-201ENSMUST00000115382 2002 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Shox2P70390 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Shox2P70390 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC11.49□□□□□ -0.57
Shox2P70390 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Mkx-201ENSMUST00000079788 3202 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Shox2P70390 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms