Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.96□□□□□ -0.66
Six5P70178 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Gm45011-201ENSMUST00000207620 2297 ntBASIC10.96□□□□□ -0.66
Six5P70178 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Six5P70178 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Six5P70178 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.95□□□□□ -0.66
Six5P70178 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.95□□□□□ -0.66
Six5P70178 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Gm7857-201ENSMUST00000117957 358 ntBASIC10.95□□□□□ -0.66
Six5P70178 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.95□□□□□ -0.66
Six5P70178 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Gm24990-201ENSMUST00000157406 323 ntBASIC10.95□□□□□ -0.66
Six5P70178 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC10.95□□□□□ -0.66
Six5P70178 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.95□□□□□ -0.66
Six5P70178 AU022133-201ENSMUST00000200601 873 ntBASIC10.95□□□□□ -0.66
Six5P70178 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.95□□□□□ -0.66
Six5P70178 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Pck2-205ENSMUST00000226352 2784 ntBASIC10.95□□□□□ -0.66
Six5P70178 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Six5P70178 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC10.95□□□□□ -0.66
Six5P70178 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Gm7841-201ENSMUST00000122108 1629 ntBASIC10.95□□□□□ -0.66
Six5P70178 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Six5P70178 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Six5P70178 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
Six5P70178 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.94□□□□□ -0.66
Six5P70178 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 Gm13347-201ENSMUST00000120298 1353 ntBASIC10.94□□□□□ -0.66
Six5P70178 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC10.94□□□□□ -0.66
Six5P70178 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 AC159308.2-201ENSMUST00000213592 2325 ntBASIC10.94□□□□□ -0.66
Six5P70178 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.94□□□□□ -0.66
Six5P70178 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.94□□□□□ -0.66
Six5P70178 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Gm29199-201ENSMUST00000187766 775 ntBASIC10.94□□□□□ -0.66
Six5P70178 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC10.94□□□□□ -0.66
Six5P70178 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC10.94□□□□□ -0.66
Six5P70178 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.94□□□□□ -0.66
Six5P70178 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC10.94□□□□□ -0.66
Six5P70178 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC10.94□□□□□ -0.66
Six5P70178 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.94□□□□□ -0.66
Six5P70178 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.94□□□□□ -0.66
Six5P70178 CT025694.1-201ENSMUST00000226188 934 ntBASIC10.94□□□□□ -0.66
Six5P70178 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Six5P70178 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC10.94□□□□□ -0.66
Six5P70178 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Six5P70178 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Six5P70178 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms