Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Ybx1P62960 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 Cog3-203ENSMUST00000227473 4197 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.97□□□□□ -0.49
Ybx1P62960 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Gm11244-201ENSMUST00000121243 237 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Gm12030-201ENSMUST00000121917 223 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.97□□□□□ -0.49
Ybx1P62960 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC11.97□□□□□ -0.49
Ybx1P62960 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Gm22877-201ENSMUST00000175451 105 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC11.97□□□□□ -0.49
Ybx1P62960 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Gm37826-201ENSMUST00000195329 322 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Gm18059-201ENSMUST00000208073 580 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC11.97□□□□□ -0.49
Ybx1P62960 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 CT009536.2-201ENSMUST00000225370 665 ntBASIC11.97□□□□□ -0.49
Ybx1P62960 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ybx1P62960 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Exoc3l4-209ENSMUST00000222897 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Ybx1P62960 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ybx1P62960 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ybx1P62960 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.96□□□□□ -0.49
Ybx1P62960 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ybx1P62960 Gm7278-201ENSMUST00000119836 1401 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ybx1P62960 Rubie-203ENSMUST00000227803 2430 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ybx1P62960 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ybx1P62960 Gm11801-201ENSMUST00000117807 746 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Gm15615-201ENSMUST00000118876 198 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Gm12969-201ENSMUST00000120199 1004 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Gm27390-201ENSMUST00000184516 176 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Gm43692-201ENSMUST00000198236 1062 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.96□□□□□ -0.49
Ybx1P62960 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC11.96□□□□□ -0.49
Ybx1P62960 CT009546.1-201ENSMUST00000222573 1120 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 CT030653.1-201ENSMUST00000224382 1279 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 AC154176.1-201ENSMUST00000225897 220 ntBASIC11.96□□□□□ -0.49
Ybx1P62960 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ybx1P62960 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ybx1P62960 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Ybx1P62960 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ybx1P62960 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ybx1P62960 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ybx1P62960 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ybx1P62960 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ybx1P62960 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ybx1P62960 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ybx1P62960 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ybx1P62960 Gm8522-201ENSMUST00000118416 1929 ntBASIC11.96□□□□□ -0.5
Ybx1P62960 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Ybx1P62960 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ybx1P62960 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms