Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Rpl39P62892 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Rpl39P62892 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Rpl39P62892 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
Rpl39P62892 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 AC123857.2-201ENSMUST00000225756 1582 ntBASIC8.3□□□□□ -1.08
Rpl39P62892 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Rpl39P62892 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC8.3□□□□□ -1.08
Rpl39P62892 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Rpl39P62892 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm5620-201ENSMUST00000077991 1348 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm7553-201ENSMUST00000185805 1426 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Gm18626-201ENSMUST00000221512 1409 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rpl39P62892 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC8.29□□□□□ -1.08
Rpl39P62892 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC8.29□□□□□ -1.08
Rpl39P62892 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rpl39P62892 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm12058-201ENSMUST00000118614 437 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Gm16177-201ENSMUST00000120728 718 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Gm12138-201ENSMUST00000122180 951 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm6114-201ENSMUST00000182472 968 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm28882-201ENSMUST00000185504 314 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm38241-201ENSMUST00000192641 898 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm7561-201ENSMUST00000211203 886 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC8.29□□□□□ -1.08
Rpl39P62892 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm4935-201ENSMUST00000221316 1198 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 AC154239.3-201ENSMUST00000226933 674 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Rpl39P62892 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Abl2-202ENSMUST00000166172 10151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC8.29□□□□□ -1.08
Rpl39P62892 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Rpl39P62892 Gm2673-201ENSMUST00000120958 1608 ntBASIC8.29□□□□□ -1.08
Rpl39P62892 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms