Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm37613-201ENSMUST00000195677 3580 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm24830-201ENSMUST00000102024 166 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm15236-201ENSMUST00000117309 379 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm25890-201ENSMUST00000177643 165 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm22614-201ENSMUST00000178300 165 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm27046-201ENSMUST00000182160 463 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.32□□□□□ -0.76
Sec61a1P61620 AC159747.1-201ENSMUST00000219903 265 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm22042-201ENSMUST00000082989 165 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm26232-201ENSMUST00000083360 166 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm26110-201ENSMUST00000083971 165 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.32□□□□□ -0.76
Sec61a1P61620 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Pip5k1a-204ENSMUST00000107232 3437 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Sec61a1P61620 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Sec61a1P61620 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm11930-201ENSMUST00000117788 190 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm13570-201ENSMUST00000140763 309 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm24845-201ENSMUST00000158034 109 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC10.31□□□□□ -0.76
Sec61a1P61620 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm4034-201ENSMUST00000187674 480 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 Gm44967-201ENSMUST00000207047 631 ntBASIC10.31□□□□□ -0.76
Sec61a1P61620 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Sec61a1P61620 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sec61a1P61620 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Sec61a1P61620 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms