Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Nphp4P59240 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Nphp4P59240 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Nphp4P59240 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Nphp4P59240 Gm15784-201ENSMUST00000120260 1462 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Gm37651-201ENSMUST00000194679 1494 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC15.68■□□□□ 0.1
Nphp4P59240 Gm43671-201ENSMUST00000200422 433 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 AC122024.3-201ENSMUST00000217719 294 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.68■□□□□ 0.1
Nphp4P59240 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nphp4P59240 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nphp4P59240 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 Gm6024-201ENSMUST00000117850 1558 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 AC154537.1-201ENSMUST00000226101 1304 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Nphp4P59240 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nphp4P59240 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC15.68■□□□□ 0.1
Nphp4P59240 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Nphp4P59240 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Nphp4P59240 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC15.67■□□□□ 0.1
Nphp4P59240 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Nphp4P59240 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Gm43334-201ENSMUST00000197740 1318 ntBASIC15.67■□□□□ 0.1
Nphp4P59240 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nphp4P59240 Acnat1-202ENSMUST00000107697 1446 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Nphp4P59240 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Gm12389-201ENSMUST00000117696 418 ntBASIC15.67■□□□□ 0.1
Nphp4P59240 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.67■□□□□ 0.1
Nphp4P59240 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC15.67■□□□□ 0.1
Nphp4P59240 Ighv2-1-201ENSMUST00000170946 353 ntBASIC15.67■□□□□ 0.1
Nphp4P59240 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC15.67■□□□□ 0.1
Nphp4P59240 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC15.67■□□□□ 0.1
Nphp4P59240 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Gm42655-201ENSMUST00000202782 1134 ntBASIC15.67■□□□□ 0.1
Nphp4P59240 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC15.67■□□□□ 0.1
Nphp4P59240 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC15.67■□□□□ 0.1
Nphp4P59240 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Nphp4P59240 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Nphp4P59240 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Nphp4P59240 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC15.66■□□□□ 0.1
Nphp4P59240 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Gm3828-201ENSMUST00000121817 257 ntBASIC15.66■□□□□ 0.1
Nphp4P59240 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Nphp4P59240 Gm4982-201ENSMUST00000160440 1098 ntBASIC15.66■□□□□ 0.1
Nphp4P59240 Gm26976-201ENSMUST00000182929 908 ntBASIC15.66■□□□□ 0.1
Nphp4P59240 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Nphp4P59240 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms