Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC13.02□□□□□ -0.33
Tpm1P58771 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC13.02□□□□□ -0.33
Tpm1P58771 Ebf2-203ENSMUST00000176161 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC13.02□□□□□ -0.33
Tpm1P58771 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC13.02□□□□□ -0.33
Tpm1P58771 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tpm1P58771 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tpm1P58771 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Tpm1P58771 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.01□□□□□ -0.33
Tpm1P58771 Gm14441-201ENSMUST00000121960 540 ntBASIC13.01□□□□□ -0.33
Tpm1P58771 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.01□□□□□ -0.33
Tpm1P58771 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.01□□□□□ -0.33
Tpm1P58771 Gm43002-201ENSMUST00000200310 155 ntBASIC13.01□□□□□ -0.33
Tpm1P58771 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Gm7964-201ENSMUST00000051522 1378 ntBASIC13.01□□□□□ -0.33
Tpm1P58771 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Gm5124-202ENSMUST00000132683 2083 ntBASIC13.01□□□□□ -0.33
Tpm1P58771 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Tpm1P58771 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tpm1P58771 Col5a2-201ENSMUST00000086430 6625 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Myh1-203ENSMUST00000124516 6081 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Gm18626-201ENSMUST00000221512 1409 ntBASIC13□□□□□ -0.33
Tpm1P58771 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC13□□□□□ -0.33
Tpm1P58771 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13□□□□□ -0.33
Tpm1P58771 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC13□□□□□ -0.33
Tpm1P58771 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC13□□□□□ -0.33
Tpm1P58771 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tpm1P58771 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tpm1P58771 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Gm6114-201ENSMUST00000182472 968 ntBASIC13□□□□□ -0.33
Tpm1P58771 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13□□□□□ -0.33
Tpm1P58771 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tpm1P58771 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tpm1P58771 Gm18986-201ENSMUST00000216029 1986 ntBASIC13□□□□□ -0.33
Tpm1P58771 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms