Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.89□□□□□ -0.51
Ddx6P54823 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Ddx6P54823 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.89□□□□□ -0.51
Ddx6P54823 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Ddx6P54823 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ddx6P54823 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.88□□□□□ -0.51
Ddx6P54823 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.88□□□□□ -0.51
Ddx6P54823 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC11.88□□□□□ -0.51
Ddx6P54823 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm15549-201ENSMUST00000121595 622 ntBASIC11.88□□□□□ -0.51
Ddx6P54823 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm5100-201ENSMUST00000195631 589 ntBASIC11.88□□□□□ -0.51
Ddx6P54823 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.88□□□□□ -0.51
Ddx6P54823 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm5298-201ENSMUST00000201122 892 ntBASIC11.88□□□□□ -0.51
Ddx6P54823 Gm3793-201ENSMUST00000204973 672 ntBASIC11.88□□□□□ -0.51
Ddx6P54823 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.88□□□□□ -0.51
Ddx6P54823 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Ddx6P54823 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.88□□□□□ -0.51
Ddx6P54823 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.88□□□□□ -0.51
Ddx6P54823 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ddx6P54823 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ddx6P54823 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC11.87□□□□□ -0.51
Ddx6P54823 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ddx6P54823 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ddx6P54823 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ddx6P54823 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ddx6P54823 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Gm25063-201ENSMUST00000104666 94 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.87□□□□□ -0.51
Ddx6P54823 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 Gm12274-201ENSMUST00000120062 385 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 Gm15744-201ENSMUST00000161734 213 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ddx6P54823 Gm37284-201ENSMUST00000193607 539 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
Ddx6P54823 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.87□□□□□ -0.51
Ddx6P54823 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.87□□□□□ -0.51
Ddx6P54823 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.87□□□□□ -0.51
Ddx6P54823 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Ddx6P54823 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.87□□□□□ -0.51
Ddx6P54823 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Atp13a1-201ENSMUST00000034326 3915 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ddx6P54823 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ddx6P54823 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ddx6P54823 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms