Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Sox3P53784 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.26□□□□□ -0.61
Sox3P53784 Mir339-201ENSMUST00000083659 96 ntBASIC11.26□□□□□ -0.61
Sox3P53784 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Sox3P53784 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.26□□□□□ -0.61
Sox3P53784 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
Sox3P53784 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox3P53784 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Gm44260-201ENSMUST00000204946 2094 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.25□□□□□ -0.61
Sox3P53784 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Gm13668-201ENSMUST00000119237 1001 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gm14760-201ENSMUST00000121831 999 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.25□□□□□ -0.61
Sox3P53784 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.25□□□□□ -0.61
Sox3P53784 Gm22877-201ENSMUST00000175451 105 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gm23771-201ENSMUST00000178702 110 ntBASIC11.25□□□□□ -0.61
Sox3P53784 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Gm43778-201ENSMUST00000199438 199 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gm42599-201ENSMUST00000201308 469 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC11.25□□□□□ -0.61
Sox3P53784 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC11.25□□□□□ -0.61
Sox3P53784 Gm17827-201ENSMUST00000211825 742 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.25□□□□□ -0.61
Sox3P53784 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 AC129219.2-201ENSMUST00000224324 701 ntBASIC11.25□□□□□ -0.61
Sox3P53784 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox3P53784 Gm25201-201ENSMUST00000083093 170 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox3P53784 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Gm11470-201ENSMUST00000118868 1475 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Gm18227-201ENSMUST00000211082 1468 ntBASIC11.25□□□□□ -0.61
Sox3P53784 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox3P53784 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Sox3P53784 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox3P53784 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox3P53784 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox3P53784 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox3P53784 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox3P53784 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Sox3P53784 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Sox3P53784 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.24□□□□□ -0.61
Sox3P53784 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms