Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC12.36□□□□□ -0.43
Shmt1P50431 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Shmt1P50431 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.36□□□□□ -0.43
Shmt1P50431 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Shmt1P50431 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Shmt1P50431 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shmt1P50431 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Shmt1P50431 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC12.35□□□□□ -0.43
Shmt1P50431 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC12.35□□□□□ -0.43
Shmt1P50431 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Shmt1P50431 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Pck2-205ENSMUST00000226352 2784 ntBASIC12.35□□□□□ -0.43
Shmt1P50431 Gm11836-201ENSMUST00000121022 441 ntBASIC12.35□□□□□ -0.43
Shmt1P50431 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.35□□□□□ -0.43
Shmt1P50431 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC12.35□□□□□ -0.43
Shmt1P50431 Gm10807-201ENSMUST00000177134 795 ntBASIC12.35□□□□□ -0.43
Shmt1P50431 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC12.35□□□□□ -0.43
Shmt1P50431 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.35□□□□□ -0.43
Shmt1P50431 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Shmt1P50431 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Shmt1P50431 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC12.35□□□□□ -0.43
Shmt1P50431 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Shmt1P50431 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Shmt1P50431 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Shmt1P50431 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Shmt1P50431 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Shmt1P50431 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Gm16166-201ENSMUST00000118291 787 ntBASIC12.34□□□□□ -0.43
Shmt1P50431 Gm15352-201ENSMUST00000118696 270 ntBASIC12.34□□□□□ -0.43
Shmt1P50431 Gm14665-201ENSMUST00000122294 557 ntBASIC12.34□□□□□ -0.43
Shmt1P50431 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.34□□□□□ -0.43
Shmt1P50431 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Shmt1P50431 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.34□□□□□ -0.43
Shmt1P50431 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.34□□□□□ -0.43
Shmt1P50431 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Shmt1P50431 Gm10179-201ENSMUST00000086233 688 ntBASIC12.34□□□□□ -0.43
Shmt1P50431 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Shmt1P50431 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Shmt1P50431 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 6820426E19Rik-201ENSMUST00000204274 1970 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Shmt1P50431 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms