Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm44415-201ENSMUST00000204151 2112 ntBASIC9.68□□□□□ -0.86
Nkx2-1P50220 Phip-201ENSMUST00000034787 10756 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Limd1-201ENSMUST00000026269 4848 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Tiam2-201ENSMUST00000072156 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
Nkx2-1P50220 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm8793-201ENSMUST00000183069 1303 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm13226-201ENSMUST00000117838 404 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm13829-201ENSMUST00000119600 138 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm14660-201ENSMUST00000119809 575 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Rprl1-201ENSMUST00000158050 327 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm8738-201ENSMUST00000172606 329 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm43433-201ENSMUST00000196573 481 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 AC130829.1-201ENSMUST00000221548 494 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 AC126253.1-201ENSMUST00000227974 824 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 n-R5s195-201ENSMUST00000082891 119 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Gm45206-201ENSMUST00000206885 2285 ntBASIC9.67□□□□□ -0.86
Nkx2-1P50220 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Smarca2-201ENSMUST00000025862 5921 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
Nkx2-1P50220 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC9.66□□□□□ -0.86
Nkx2-1P50220 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC9.66□□□□□ -0.86
Nkx2-1P50220 Gm13570-201ENSMUST00000140763 309 ntBASIC9.66□□□□□ -0.86
Nkx2-1P50220 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Gm6114-201ENSMUST00000182472 968 ntBASIC9.66□□□□□ -0.86
Nkx2-1P50220 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
Nkx2-1P50220 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms