Protein–RNA interactions for Protein: P48030

Tgfa, Protransforming growth factor alpha, mousemouse

Predictions only

Length 159 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TgfaP48030 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC10.18□□□□□ -0.78
TgfaP48030 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
TgfaP48030 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC10.18□□□□□ -0.78
TgfaP48030 Gm10100-201ENSMUST00000179726 363 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
TgfaP48030 Gm26989-201ENSMUST00000182608 749 ntBASIC10.18□□□□□ -0.78
TgfaP48030 Gm28833-201ENSMUST00000189671 559 ntBASIC10.18□□□□□ -0.78
TgfaP48030 Gm7504-201ENSMUST00000201449 424 ntBASIC10.18□□□□□ -0.78
TgfaP48030 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.18□□□□□ -0.78
TgfaP48030 Gm18968-201ENSMUST00000221319 862 ntBASIC10.18□□□□□ -0.78
TgfaP48030 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 AC118639.2-201ENSMUST00000226289 223 ntBASIC10.18□□□□□ -0.78
TgfaP48030 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
TgfaP48030 Gm16380-201ENSMUST00000077997 478 ntBASIC10.18□□□□□ -0.78
TgfaP48030 n-R5s185-201ENSMUST00000083953 119 ntBASIC10.18□□□□□ -0.78
TgfaP48030 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
TgfaP48030 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
TgfaP48030 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
TgfaP48030 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
TgfaP48030 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.18□□□□□ -0.78
TgfaP48030 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.18□□□□□ -0.78
TgfaP48030 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.18□□□□□ -0.78
TgfaP48030 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
TgfaP48030 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
TgfaP48030 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC10.17□□□□□ -0.78
TgfaP48030 Gm11979-201ENSMUST00000119629 743 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC10.17□□□□□ -0.78
TgfaP48030 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Gm18201-201ENSMUST00000174735 875 ntBASIC10.17□□□□□ -0.78
TgfaP48030 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.17□□□□□ -0.78
TgfaP48030 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Gm43380-201ENSMUST00000200421 220 ntBASIC10.17□□□□□ -0.78
TgfaP48030 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
TgfaP48030 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Gm3433-201ENSMUST00000210149 1058 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Gm6390-201ENSMUST00000215034 589 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.17□□□□□ -0.78
TgfaP48030 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 Gm18041-201ENSMUST00000218210 618 ntBASIC10.17□□□□□ -0.78
TgfaP48030 CT025602.2-201ENSMUST00000226553 772 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.17□□□□□ -0.78
TgfaP48030 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Gm10263-201ENSMUST00000085163 300 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
TgfaP48030 Gm8038-201ENSMUST00000164674 2044 ntBASIC10.17□□□□□ -0.78
TgfaP48030 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.17□□□□□ -0.78
TgfaP48030 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
TgfaP48030 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms