Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.09□□□□□ -0.63
Nkx2-6P43688 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Nkx2-6P43688 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.08□□□□□ -0.63
Nkx2-6P43688 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Slc6a16-201ENSMUST00000179310 2007 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm11783-201ENSMUST00000119549 885 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm15725-201ENSMUST00000119947 1090 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm9192-201ENSMUST00000183221 985 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm37458-201ENSMUST00000194055 410 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm7940-201ENSMUST00000218195 769 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm37348-201ENSMUST00000193104 1789 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm37324-201ENSMUST00000194500 4504 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Nkx2-6P43688 Gm13384-201ENSMUST00000117166 1344 ntBASIC11.08□□□□□ -0.64
Nkx2-6P43688 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Nkx2-6P43688 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Gm38151-201ENSMUST00000195085 289 ntBASIC11.07□□□□□ -0.64
Nkx2-6P43688 Ccdc12-201ENSMUST00000019803 834 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Gm42599-201ENSMUST00000201308 469 ntBASIC11.07□□□□□ -0.64
Nkx2-6P43688 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Nkx2-6P43688 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Nkx2-6P43688 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms