Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm4750-201ENSMUST00000151942 1142 ntBASIC12.04□□□□□ -0.48
HttP42859 Gm16013-201ENSMUST00000152249 353 ntTSL 3 BASIC12.04□□□□□ -0.48
HttP42859 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Gm44640-201ENSMUST00000206894 247 ntBASIC12.04□□□□□ -0.48
HttP42859 AC127583.1-201ENSMUST00000224351 540 ntBASIC12.04□□□□□ -0.48
HttP42859 AC163646.3-201ENSMUST00000228879 772 ntBASIC12.04□□□□□ -0.48
HttP42859 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HttP42859 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HttP42859 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.04□□□□□ -0.48
HttP42859 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC12.03□□□□□ -0.48
HttP42859 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Mtcp1-202ENSMUST00000114081 980 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HttP42859 Cyp2j15-ps-201ENSMUST00000122267 686 ntBASIC12.03□□□□□ -0.48
HttP42859 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC12.03□□□□□ -0.48
HttP42859 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12.03□□□□□ -0.48
HttP42859 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.03□□□□□ -0.48
HttP42859 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Gm9574-201ENSMUST00000173127 845 ntBASIC12.03□□□□□ -0.48
HttP42859 Gm22616-201ENSMUST00000179783 100 ntBASIC12.03□□□□□ -0.48
HttP42859 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC12.03□□□□□ -0.48
HttP42859 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC12.03□□□□□ -0.48
HttP42859 AC123698.1-201ENSMUST00000227090 402 ntBASIC12.03□□□□□ -0.48
HttP42859 AC163646.3-202ENSMUST00000228685 691 ntBASIC12.03□□□□□ -0.48
HttP42859 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.03□□□□□ -0.48
HttP42859 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.03□□□□□ -0.48
HttP42859 AC090962.2-201ENSMUST00000225064 1801 ntBASIC12.03□□□□□ -0.48
HttP42859 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HttP42859 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.02□□□□□ -0.48
HttP42859 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
HttP42859 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 AC165260.2-201ENSMUST00000225371 395 ntBASIC12.02□□□□□ -0.48
HttP42859 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 Gm10238-201ENSMUST00000089689 408 ntBASIC12.02□□□□□ -0.48
HttP42859 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
HttP42859 4933405D12Rik-201ENSMUST00000180557 1383 ntTSL 2 BASIC12.02□□□□□ -0.48
HttP42859 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.48
HttP42859 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
HttP42859 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.02□□□□□ -0.48
HttP42859 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HttP42859 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HttP42859 Zfp419-201ENSMUST00000173446 916 ntBASIC12.02□□□□□ -0.49
HttP42859 Mir6396-201ENSMUST00000183603 111 ntBASIC12.02□□□□□ -0.49
HttP42859 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC12.02□□□□□ -0.49
HttP42859 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Gm8525-201ENSMUST00000189674 861 ntBASIC12.02□□□□□ -0.49
HttP42859 Gm6677-201ENSMUST00000195100 441 ntBASIC12.02□□□□□ -0.49
HttP42859 Gm43103-201ENSMUST00000199021 802 ntBASIC12.02□□□□□ -0.49
HttP42859 Ormdl2-203ENSMUST00000219215 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC12.02□□□□□ -0.49
HttP42859 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 AC116503.1-201ENSMUST00000215445 2192 ntBASIC12.02□□□□□ -0.49
HttP42859 Gm38348-201ENSMUST00000191718 2273 ntBASIC12.02□□□□□ -0.49
HttP42859 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.02□□□□□ -0.49
HttP42859 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
HttP42859 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
HttP42859 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Gm12377-201ENSMUST00000118656 252 ntBASIC12.02□□□□□ -0.49
HttP42859 Gm8163-201ENSMUST00000122020 1060 ntBASIC12.02□□□□□ -0.49
HttP42859 Gal3st2b-201ENSMUST00000177958 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC12.02□□□□□ -0.49
HttP42859 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
HttP42859 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
HttP42859 Faf2-201ENSMUST00000026991 1748 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms