Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx2-2P42586 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
Nkx2-2P42586 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx2-2P42586 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Nkx2-2P42586 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Irak4-201ENSMUST00000074936 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm14058-201ENSMUST00000116082 735 ntBASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm12579-201ENSMUST00000118040 783 ntBASIC10.7□□□□□ -0.7
Nkx2-2P42586 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm6108-201ENSMUST00000208365 367 ntBASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm5369-201ENSMUST00000217499 588 ntBASIC10.7□□□□□ -0.7
Nkx2-2P42586 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.7□□□□□ -0.7
Nkx2-2P42586 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm10254-201ENSMUST00000052888 867 ntBASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm4978-201ENSMUST00000071565 801 ntBASIC10.7□□□□□ -0.7
Nkx2-2P42586 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Paupar-201ENSMUST00000194826 3482 ntBASIC10.7□□□□□ -0.7
Nkx2-2P42586 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Nkx2-2P42586 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Nkx2-2P42586 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 AC113441.2-201ENSMUST00000221538 1468 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm43984-201ENSMUST00000204572 2864 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm12217-201ENSMUST00000118858 696 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm11941-201ENSMUST00000119904 610 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm8459-201ENSMUST00000162504 760 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Gm5363-201ENSMUST00000211927 938 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC10.69□□□□□ -0.7
Nkx2-2P42586 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Nkx2-2P42586 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms