Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.97□□□□□ -0.49
Mmp13P33435 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Mmp13P33435 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC11.97□□□□□ -0.49
Mmp13P33435 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Mmp13P33435 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Mmp13P33435 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Mmp13P33435 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC11.97□□□□□ -0.49
Mmp13P33435 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Mmp13P33435 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Mmp13P33435 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Mmp13P33435 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Mmp13P33435 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Mmp13P33435 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Mmp13P33435 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Mmp13P33435 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.96□□□□□ -0.49
Mmp13P33435 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC11.96□□□□□ -0.49
Mmp13P33435 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Gm14277-201ENSMUST00000121195 360 ntBASIC11.96□□□□□ -0.49
Mmp13P33435 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC11.96□□□□□ -0.49
Mmp13P33435 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.96□□□□□ -0.49
Mmp13P33435 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC11.96□□□□□ -0.49
Mmp13P33435 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC11.96□□□□□ -0.49
Mmp13P33435 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.96□□□□□ -0.49
Mmp13P33435 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.96□□□□□ -0.49
Mmp13P33435 Gm19187-201ENSMUST00000206781 892 ntBASIC11.96□□□□□ -0.49
Mmp13P33435 Gm45224-201ENSMUST00000208203 414 ntBASIC11.96□□□□□ -0.49
Mmp13P33435 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC11.96□□□□□ -0.49
Mmp13P33435 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.96□□□□□ -0.49
Mmp13P33435 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Mmp13P33435 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.96□□□□□ -0.49
Mmp13P33435 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Mmp13P33435 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Mmp13P33435 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Mmp13P33435 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Mmp13P33435 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Mmp13P33435 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.96□□□□□ -0.5
Mmp13P33435 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Mmp13P33435 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.96□□□□□ -0.5
Mmp13P33435 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Mmp13P33435 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Mmp13P33435 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Mmp13P33435 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.95□□□□□ -0.5
Mmp13P33435 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
Mmp13P33435 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Mmp13P33435 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.95□□□□□ -0.5
Mmp13P33435 Gm12997-201ENSMUST00000120207 640 ntBASIC11.95□□□□□ -0.5
Mmp13P33435 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.95□□□□□ -0.5
Mmp13P33435 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC11.95□□□□□ -0.5
Mmp13P33435 Gm5363-201ENSMUST00000211927 938 ntBASIC11.95□□□□□ -0.5
Mmp13P33435 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC11.95□□□□□ -0.5
Mmp13P33435 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 AC154252.2-201ENSMUST00000223593 767 ntBASIC11.95□□□□□ -0.5
Mmp13P33435 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Mmp13P33435 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Mmp13P33435 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms