Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col2a1P28481 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col2a1P28481 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col2a1P28481 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.11□□□□□ -0.31
Col2a1P28481 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col2a1P28481 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col2a1P28481 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC13.11□□□□□ -0.31
Col2a1P28481 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.11□□□□□ -0.31
Col2a1P28481 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Col2a1P28481 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 AC154639.1-201ENSMUST00000224393 2849 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col2a1P28481 Gm13445-201ENSMUST00000121664 307 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Gm3828-201ENSMUST00000121817 257 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.1□□□□□ -0.31
Col2a1P28481 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col2a1P28481 Gm26976-201ENSMUST00000182929 908 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col2a1P28481 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Col2a1P28481 Prss3-201ENSMUST00000096003 822 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Col2a1P28481 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col2a1P28481 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC13.1□□□□□ -0.31
Col2a1P28481 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC13.1□□□□□ -0.31
Col2a1P28481 Gm44056-201ENSMUST00000204623 1427 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Ecsit-204ENSMUST00000180180 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Snord17-201ENSMUST00000104526 238 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Snord23-201ENSMUST00000116828 109 ntBASIC13.1□□□□□ -0.31
Col2a1P28481 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Col2a1P28481 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.1□□□□□ -0.31
Col2a1P28481 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.1□□□□□ -0.31
Col2a1P28481 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC13.1□□□□□ -0.31
Col2a1P28481 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC13.1□□□□□ -0.31
Col2a1P28481 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Col2a1P28481 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Col2a1P28481 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Col2a1P28481 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col2a1P28481 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Col2a1P28481 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
Col2a1P28481 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Col2a1P28481 Gm11560-201ENSMUST00000117567 948 ntBASIC13.09□□□□□ -0.31
Col2a1P28481 Gm13351-201ENSMUST00000118087 414 ntBASIC13.09□□□□□ -0.31
Col2a1P28481 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Gm25343-201ENSMUST00000157460 107 ntBASIC13.09□□□□□ -0.31
Col2a1P28481 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.09□□□□□ -0.31
Col2a1P28481 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.09□□□□□ -0.31
Col2a1P28481 Gm2594-201ENSMUST00000214774 742 ntBASIC13.09□□□□□ -0.31
Col2a1P28481 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC13.09□□□□□ -0.31
Col2a1P28481 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Col2a1P28481 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Col2a1P28481 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.09□□□□□ -0.31
Col2a1P28481 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms