Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC12.12□□□□□ -0.47
Hoxd8P23463 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm13422-201ENSMUST00000118834 504 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm12274-201ENSMUST00000120062 385 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm14219-201ENSMUST00000120414 288 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm13117-201ENSMUST00000120894 691 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm6649-201ENSMUST00000199743 1165 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm3726-201ENSMUST00000203110 785 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm45071-201ENSMUST00000205353 571 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm39288-201ENSMUST00000210554 446 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hoxd8P23463 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxd8P23463 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.12□□□□□ -0.47
Hoxd8P23463 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Hoxd8P23463 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Hoxd8P23463 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Hoxd8P23463 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Hoxd8P23463 AC130823.1-201ENSMUST00000228929 1549 ntBASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hoxd8P23463 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Krcc1-201ENSMUST00000080949 1393 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Oprl1-204ENSMUST00000108767 1248 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Ntm-202ENSMUST00000115236 1072 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm6312-201ENSMUST00000204060 1194 ntBASIC12.11□□□□□ -0.47
Hoxd8P23463 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.11□□□□□ -0.47
Hoxd8P23463 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Hoxd8P23463 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Hoxd8P23463 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.11□□□□□ -0.47
Hoxd8P23463 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Hoxd8P23463 AC158636.1-201ENSMUST00000220118 1393 ntBASIC12.1□□□□□ -0.47
Hoxd8P23463 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Hoxd8P23463 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Hoxd8P23463 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms