Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC11.02□□□□□ -0.65
Clk1P22518 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Clk1P22518 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.02□□□□□ -0.65
Clk1P22518 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
Clk1P22518 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Clk1P22518 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Tmem74bos-202ENSMUST00000149319 2090 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Gm42971-201ENSMUST00000199228 2079 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Gm13665-201ENSMUST00000120830 528 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.01□□□□□ -0.65
Clk1P22518 Gm5070-201ENSMUST00000177599 862 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Gm32999-201ENSMUST00000192693 562 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Rprl1-202ENSMUST00000198476 238 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 Gm18615-201ENSMUST00000222919 1031 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Tmem184b-205ENSMUST00000228002 3315 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Actr2-201ENSMUST00000000137 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
Clk1P22518 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Zfp384-201ENSMUST00000046064 3108 ntTSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Lpin3-201ENSMUST00000040872 3458 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Ilf3-208ENSMUST00000214758 3177 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
Clk1P22518 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Gm10531-201ENSMUST00000193527 2303 ntBASIC11.01□□□□□ -0.65
Clk1P22518 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Clk1P22518 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.01□□□□□ -0.65
Clk1P22518 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11□□□□□ -0.65
Clk1P22518 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11□□□□□ -0.65
Clk1P22518 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11□□□□□ -0.65
Clk1P22518 Gm10782-202ENSMUST00000223775 1480 ntBASIC11□□□□□ -0.65
Clk1P22518 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Clk1P22518 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Gm15610-201ENSMUST00000120584 195 ntBASIC11□□□□□ -0.65
Clk1P22518 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11□□□□□ -0.65
Clk1P22518 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC11□□□□□ -0.65
Clk1P22518 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC11□□□□□ -0.65
Clk1P22518 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC11□□□□□ -0.65
Clk1P22518 Gm38317-201ENSMUST00000195564 343 ntBASIC11□□□□□ -0.65
Clk1P22518 Gm44651-201ENSMUST00000207343 372 ntBASIC11□□□□□ -0.65
Clk1P22518 Gm45598-202ENSMUST00000210719 986 ntBASIC11□□□□□ -0.65
Clk1P22518 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11□□□□□ -0.65
Clk1P22518 AC153929.1-201ENSMUST00000219009 303 ntBASIC11□□□□□ -0.65
Clk1P22518 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11□□□□□ -0.65
Clk1P22518 AC123665.1-201ENSMUST00000228204 438 ntBASIC11□□□□□ -0.65
Clk1P22518 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Ctcfl-201ENSMUST00000094287 3217 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Clk1P22518 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Clk1P22518 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Clk1P22518 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Clk1P22518 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Clk1P22518 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms