Protein–RNA interactions for Protein: P20293

T, Brachyury protein, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TP20293 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
TP20293 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.04□□□□□ -0.64
TP20293 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
TP20293 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.04□□□□□ -0.64
TP20293 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
TP20293 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TP20293 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
TP20293 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.04□□□□□ -0.64
TP20293 Gm14017-201ENSMUST00000121934 386 ntBASIC11.04□□□□□ -0.64
TP20293 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TP20293 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Gm27627-201ENSMUST00000183644 150 ntBASIC11.04□□□□□ -0.64
TP20293 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC11.04□□□□□ -0.64
TP20293 Gm29615-201ENSMUST00000185371 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm28224-201ENSMUST00000186078 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm29001-201ENSMUST00000186177 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm28292-201ENSMUST00000186593 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm28101-201ENSMUST00000187608 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm29076-201ENSMUST00000187689 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm28302-201ENSMUST00000187931 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm28646-201ENSMUST00000188220 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm28205-201ENSMUST00000189177 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm29032-201ENSMUST00000189797 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm28695-201ENSMUST00000190300 697 ntBASIC11.04□□□□□ -0.64
TP20293 Gm37448-201ENSMUST00000192795 697 ntBASIC11.04□□□□□ -0.64
TP20293 Ighv4-2-201ENSMUST00000192975 362 ntBASIC11.04□□□□□ -0.64
TP20293 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.04□□□□□ -0.64
TP20293 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.04□□□□□ -0.64
TP20293 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC11.04□□□□□ -0.64
TP20293 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.04□□□□□ -0.64
TP20293 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.04□□□□□ -0.64
TP20293 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
TP20293 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.04□□□□□ -0.64
TP20293 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.04□□□□□ -0.64
TP20293 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.04□□□□□ -0.64
TP20293 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.04□□□□□ -0.64
TP20293 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
TP20293 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.03□□□□□ -0.64
TP20293 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.03□□□□□ -0.64
TP20293 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC11.03□□□□□ -0.64
TP20293 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
TP20293 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
TP20293 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.03□□□□□ -0.64
TP20293 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.03□□□□□ -0.64
TP20293 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.03□□□□□ -0.64
TP20293 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC11.03□□□□□ -0.64
TP20293 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
TP20293 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
TP20293 Gm18212-201ENSMUST00000211678 889 ntBASIC11.03□□□□□ -0.64
TP20293 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms