Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Gm25700-201ENSMUST00000177693 110 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Gm4310-201ENSMUST00000177847 889 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.28□□□□□ -0.6
Fv4P11370 Gm5982-201ENSMUST00000196234 512 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Gm43438-201ENSMUST00000198133 379 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Gm44364-201ENSMUST00000198368 141 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Gm43966-201ENSMUST00000203301 612 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Fv4P11370 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC11.28□□□□□ -0.6
Fv4P11370 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC11.28□□□□□ -0.6
Fv4P11370 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Odf4-201ENSMUST00000038932 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.28□□□□□ -0.6
Fv4P11370 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC11.28□□□□□ -0.6
Fv4P11370 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Gm36987-201ENSMUST00000194704 2979 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Fv4P11370 Erich3-203ENSMUST00000189969 3460 ntBASIC11.28□□□□□ -0.6
Fv4P11370 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Fv4P11370 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.27□□□□□ -0.6
Fv4P11370 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fv4P11370 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.27□□□□□ -0.6
Fv4P11370 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fv4P11370 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.27□□□□□ -0.6
Fv4P11370 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Fv4P11370 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fv4P11370 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fv4P11370 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fv4P11370 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Fv4P11370 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC11.27□□□□□ -0.6
Fv4P11370 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Fv4P11370 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Cdc42ep4-201ENSMUST00000053536 3008 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Fv4P11370 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Fv4P11370 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC11.27□□□□□ -0.61
Fv4P11370 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC11.27□□□□□ -0.61
Fv4P11370 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.27□□□□□ -0.61
Fv4P11370 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.27□□□□□ -0.61
Fv4P11370 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC11.27□□□□□ -0.61
Fv4P11370 Gm43758-201ENSMUST00000199500 367 ntBASIC11.27□□□□□ -0.61
Fv4P11370 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Gm9797-202ENSMUST00000218003 294 ntBASIC11.27□□□□□ -0.61
Fv4P11370 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Fv4P11370 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Fv4P11370 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
Fv4P11370 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fv4P11370 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fv4P11370 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Fv4P11370 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Fv4P11370 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Fv4P11370 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.27□□□□□ -0.61
Fv4P11370 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Slc1a2-203ENSMUST00000111212 1957 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Fv4P11370 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Fv4P11370 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.26□□□□□ -0.61
Fv4P11370 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.26□□□□□ -0.61
Fv4P11370 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.26□□□□□ -0.61
Fv4P11370 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Fv4P11370 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 C5ar1-202ENSMUST00000168818 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Fv4P11370 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms