Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccl3P10855 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm25053-201ENSMUST00000103982 133 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Gm25922-201ENSMUST00000104281 130 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC10.3□□□□□ -0.76
Ccl3P10855 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm24679-201ENSMUST00000158762 111 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm20495-201ENSMUST00000173902 235 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm26989-201ENSMUST00000182608 749 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Gm28833-201ENSMUST00000189671 559 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Gm25053-202ENSMUST00000199731 132 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Gm43671-201ENSMUST00000200422 433 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 AC153152.3-201ENSMUST00000222188 1135 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 AC154361.2-201ENSMUST00000224747 943 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
Ccl3P10855 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.3□□□□□ -0.76
Ccl3P10855 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
Ccl3P10855 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Ccl3P10855 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC10.3□□□□□ -0.76
Ccl3P10855 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC10.29□□□□□ -0.76
Ccl3P10855 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.29□□□□□ -0.76
Ccl3P10855 Gm7224-201ENSMUST00000121359 2066 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Ccl3P10855 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Gm21759-201ENSMUST00000178345 1828 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccl3P10855 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC10.29□□□□□ -0.76
Ccl3P10855 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC10.29□□□□□ -0.76
Ccl3P10855 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccl3P10855 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccl3P10855 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Gm9673-201ENSMUST00000119287 781 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Gm12791-201ENSMUST00000120788 655 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ccl3P10855 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Ccl3P10855 Gm23694-201ENSMUST00000179335 110 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Mir7051-201ENSMUST00000184167 73 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Gm8197-202ENSMUST00000193422 934 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Gm37284-201ENSMUST00000193607 539 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Gm43778-201ENSMUST00000199438 199 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Gm42599-201ENSMUST00000201308 469 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccl3P10855 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 AC126799.1-201ENSMUST00000221976 246 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 CT573086.4-201ENSMUST00000226729 342 ntBASIC10.29□□□□□ -0.76
Ccl3P10855 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC10.29□□□□□ -0.76
Ccl3P10855 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Ccl3P10855 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Ccl3P10855 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Ccl3P10855 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms