Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Gm807-202ENSMUST00000224929 408 ntBASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Chmp6P0C0A3 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Gm26286-201ENSMUST00000104166 134 ntBASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Gm16570-201ENSMUST00000161951 436 ntBASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Rgr-203ENSMUST00000225070 4704 ntBASIC12.74□□□□□ -0.37
Chmp6P0C0A3 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Chmp6P0C0A3 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Gm23200-201ENSMUST00000104379 132 ntBASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Gm12266-201ENSMUST00000120311 962 ntBASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp6P0C0A3 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp6P0C0A3 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 57.7 ms