Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Otof-201ENSMUST00000074171 7129 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.05□□□□□ -0.64
ApoeP08226 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Gm2546-201ENSMUST00000182630 991 ntBASIC11.05□□□□□ -0.64
ApoeP08226 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 1700008C04Rik-201ENSMUST00000218606 797 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.05□□□□□ -0.64
ApoeP08226 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.05□□□□□ -0.64
ApoeP08226 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.05□□□□□ -0.64
ApoeP08226 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC11.05□□□□□ -0.64
ApoeP08226 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
ApoeP08226 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
ApoeP08226 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.05□□□□□ -0.64
ApoeP08226 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Gm42141-201ENSMUST00000196534 2172 ntBASIC11.04□□□□□ -0.64
ApoeP08226 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
ApoeP08226 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 AC164099.2-201ENSMUST00000227795 2005 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
ApoeP08226 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.04□□□□□ -0.64
ApoeP08226 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Gm10434-201ENSMUST00000101158 471 ntBASIC11.04□□□□□ -0.64
ApoeP08226 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Mir1247-201ENSMUST00000116706 82 ntBASIC11.04□□□□□ -0.64
ApoeP08226 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.04□□□□□ -0.64
ApoeP08226 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC11.04□□□□□ -0.64
ApoeP08226 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC11.04□□□□□ -0.64
ApoeP08226 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
ApoeP08226 Gm38230-201ENSMUST00000193572 1159 ntBASIC11.04□□□□□ -0.64
ApoeP08226 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
ApoeP08226 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.04□□□□□ -0.64
ApoeP08226 Tdrd3-202ENSMUST00000168275 2657 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Gm19178-201ENSMUST00000217524 1819 ntBASIC11.04□□□□□ -0.64
ApoeP08226 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
ApoeP08226 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.04□□□□□ -0.64
ApoeP08226 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
ApoeP08226 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
ApoeP08226 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
ApoeP08226 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.03□□□□□ -0.64
ApoeP08226 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC11.03□□□□□ -0.64
ApoeP08226 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms