Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Gm13369-201ENSMUST00000119442 987 ntBASIC8.53□□□□□ -1.04
TcraP01849 Gm11814-201ENSMUST00000119515 929 ntBASIC8.53□□□□□ -1.04
TcraP01849 Gm11803-201ENSMUST00000119966 444 ntBASIC8.53□□□□□ -1.04
TcraP01849 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
TcraP01849 Gm11637-201ENSMUST00000120601 592 ntBASIC8.53□□□□□ -1.04
TcraP01849 Gm16479-201ENSMUST00000121706 932 ntBASIC8.53□□□□□ -1.04
TcraP01849 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC8.53□□□□□ -1.04
TcraP01849 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
TcraP01849 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
TcraP01849 Gm27839-201ENSMUST00000184242 106 ntBASIC8.53□□□□□ -1.04
TcraP01849 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
TcraP01849 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC8.53□□□□□ -1.04
TcraP01849 Gm44799-201ENSMUST00000207639 1202 ntBASIC8.53□□□□□ -1.04
TcraP01849 Gm6007-201ENSMUST00000208170 823 ntBASIC8.53□□□□□ -1.04
TcraP01849 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC8.53□□□□□ -1.04
TcraP01849 AC153974.2-201ENSMUST00000218577 1025 ntBASIC8.53□□□□□ -1.04
TcraP01849 AC153929.1-201ENSMUST00000219009 303 ntBASIC8.53□□□□□ -1.04
TcraP01849 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 AC110817.1-201ENSMUST00000225706 605 ntBASIC8.53□□□□□ -1.04
TcraP01849 Gm2824-203ENSMUST00000226189 1228 ntBASIC8.53□□□□□ -1.04
TcraP01849 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Gm43773-201ENSMUST00000198548 2162 ntBASIC8.53□□□□□ -1.04
TcraP01849 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Gm6189-201ENSMUST00000164487 2082 ntBASIC8.53□□□□□ -1.04
TcraP01849 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Gm29358-202ENSMUST00000187941 3227 ntBASIC8.53□□□□□ -1.04
TcraP01849 CK137956-201ENSMUST00000030614 2319 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC8.53□□□□□ -1.04
TcraP01849 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Sox13-203ENSMUST00000144386 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
TcraP01849 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
TcraP01849 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC8.52□□□□□ -1.04
TcraP01849 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC8.52□□□□□ -1.04
TcraP01849 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC8.52□□□□□ -1.04
TcraP01849 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.04
TcraP01849 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
TcraP01849 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
TcraP01849 Gm44775-201ENSMUST00000207266 1456 ntBASIC8.52□□□□□ -1.05
TcraP01849 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Gpr155-204ENSMUST00000112044 4201 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
TcraP01849 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC8.52□□□□□ -1.05
TcraP01849 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Gm3836-201ENSMUST00000211377 1613 ntBASIC8.52□□□□□ -1.05
TcraP01849 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
TcraP01849 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC8.52□□□□□ -1.05
TcraP01849 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC8.52□□□□□ -1.05
TcraP01849 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC8.52□□□□□ -1.05
TcraP01849 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC8.52□□□□□ -1.05
TcraP01849 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC8.52□□□□□ -1.05
TcraP01849 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC8.52□□□□□ -1.05
TcraP01849 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC8.52□□□□□ -1.05
TcraP01849 Gm44772-201ENSMUST00000207623 1191 ntBASIC8.52□□□□□ -1.05
TcraP01849 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC8.52□□□□□ -1.05
TcraP01849 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC8.52□□□□□ -1.05
TcraP01849 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Wdyhv1-206ENSMUST00000227142 786 ntBASIC8.52□□□□□ -1.05
TcraP01849 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
TcraP01849 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
TcraP01849 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC8.52□□□□□ -1.05
TcraP01849 AC154352.1-201ENSMUST00000221477 2365 ntBASIC8.52□□□□□ -1.05
TcraP01849 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Gm11298-201ENSMUST00000120503 1799 ntBASIC8.52□□□□□ -1.05
TcraP01849 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
TcraP01849 Tiam2-202ENSMUST00000169838 5725 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms