Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC12.65□□□□□ -0.38
Vti1aO89116 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC12.65□□□□□ -0.38
Vti1aO89116 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.65□□□□□ -0.38
Vti1aO89116 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm13263-201ENSMUST00000121271 838 ntBASIC12.65□□□□□ -0.38
Vti1aO89116 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm27910-201ENSMUST00000185004 107 ntBASIC12.65□□□□□ -0.38
Vti1aO89116 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC12.65□□□□□ -0.38
Vti1aO89116 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm5537-201ENSMUST00000091117 1252 ntBASIC12.65□□□□□ -0.38
Vti1aO89116 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.65□□□□□ -0.38
Vti1aO89116 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Vti1aO89116 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Vti1aO89116 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vti1aO89116 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Vti1aO89116 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC12.64□□□□□ -0.39
Vti1aO89116 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.64□□□□□ -0.39
Vti1aO89116 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Vti1aO89116 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vti1aO89116 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Gm13916-201ENSMUST00000117368 628 ntBASIC12.64□□□□□ -0.39
Vti1aO89116 Gm15725-201ENSMUST00000119947 1090 ntBASIC12.64□□□□□ -0.39
Vti1aO89116 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.64□□□□□ -0.39
Vti1aO89116 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Vti1aO89116 AC153505.1-201ENSMUST00000218819 1071 ntBASIC12.64□□□□□ -0.39
Vti1aO89116 AC153929.1-201ENSMUST00000219009 303 ntBASIC12.64□□□□□ -0.39
Vti1aO89116 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Vti1aO89116 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Vti1aO89116 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.64□□□□□ -0.39
Vti1aO89116 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Vti1aO89116 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.64□□□□□ -0.39
Vti1aO89116 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.64□□□□□ -0.39
Vti1aO89116 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Vti1aO89116 Gm5419-201ENSMUST00000119301 527 ntBASIC12.63□□□□□ -0.39
Vti1aO89116 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.63□□□□□ -0.39
Vti1aO89116 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC12.63□□□□□ -0.39
Vti1aO89116 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 Gm6485-201ENSMUST00000160676 439 ntBASIC12.63□□□□□ -0.39
Vti1aO89116 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Vti1aO89116 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.63□□□□□ -0.39
Vti1aO89116 Gm5706-201ENSMUST00000181525 993 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms